Select Publications from Completed Projects

Wang L, Desai H, Verma SS, Le A, Hausler R, Verma A, Judy R, Doucette A, Gabriel PE, Nathanson KL, Damrauer S, Mowery DL, Ritchie MD, Kember RL, Maxwell KN. Performance of polygenic risk scores for cancer prediction in a racially diverse academic biobank. medRxiv. Cold Spring Harbor Laboratory Press, 2021.

Yu S, Le A, Feld E, Schriver E, Gabriel P, Doucette A, Narayan V, Feldman M, Schwartz LE, Maxwell K, Mowery D. Development of an NLP-Assisted Extraction System for Gleason Scores: Combining the Strengths of Humans and Machines. Journal of Medical Internet Research Cancer 2021 Notes: accepted.

Freedman H, Williams H, Birtwell D, Miller M, Mowery D, Stoeckert C: A Novel Tool for Standardizing Clinical Data in a Semantic Common Data Model. Journal of Biomedical Informatics: X 8: 100086, Dec 2020.

Harris JR, Hatch R, Vallabhajosyula P, Lo Y, Mowery D, Patel N. Morning vs. Evening Administration of Warfarin following Cardiac Surgery. The Journal of Pharmacy Technology 2020.

Schriver E, Lieblich S, AlRabiah R, Mowery DL, Brown LA. Identifying risk factors for suicidal ideation across a large community healthcare system. J Affect Disord 276: 1038-1045, Nov 2020.

Falcone M, Luo C, Chen Y, Birtwell D, Cheatle M, Duan R, Gabriel PE, He L, Ko EM, Lenz HJ, Mirkovic N, Mowery DL, Ochroch EA, Paulson EC, Schriver E, Schnoll RA, Bekelman JE, Lerman C. Risk of Persistent Opioid Use following Major Surgery in Matched Samples of Patients with and without Cancer. Cancer Epidemiol Biomarkers Prev 29: 2126-2133, Nov 2020.

Lo Y, Lynch SF, Urbanowicz RJ, Olson RS, Ritter AZ, Whitehouse CR, O’Connor M, Keim SK, McDonald M, Moore JH, Bowles KH. Using Machine Learning on Home Health Care Assessments to Predict Fall Risk. Stud Health Technol Inform. 2019 Aug 21;264:684-688. doi: 10.3233/SHTI190310. PMID: 31438011.

Sivendran S, Lynch S, McNaughton C, et al. Anticancer Therapy at the End of Life: Lessons From a Community Cancer Institute. Journal of Palliative Care. 2021;36(2):87-92.

Hong J, Lo Y, Ritter AZ, Whitehouse CR, O’Conner M, Keim SK, McDonald M, Moore JH, Bowles KH, Mowery DL. Identifying Falls Not Documented with Administrative Codes using Natural Language Processing. ICIBM 2020. Philadelphia, PA

Lynch S, Schriver E, Mowery D, Schultz R, Guthrie W. Validation of Electronic Health Record Autism Diagnoses for Study Participant Recruitment. International Society for Autism Research 2020. Seattle, WA

 

COVID-19 Research Publications

Shaw PA, Yang J, Ellenberg S, Schriver E, Mowery D, Bar KJ. Determinants of COVID-19 Hospital Outcomes in a Large Pennsylvania Health System. Conference on Retroviruses and Opportunistic Infections. virtualConference on Retroviruses & Opportunistic Infections (CROI). 2021.

Cappola AR, Schriver ER, Mowery DL, Wollack C, Ives CT, Gonzales R, Cappella JN. Effect of Communication Strategies on Return to In-Person Visits During the COVID-19 Pandemic.

Le TT, Gutiérrez-Sacristán A, Son J, Hong C, South AM, Beaulieu-Jones BK, Loh NHW, Luo Y, Morris M, Ngiam KY, Patel LP, Samayamuthu MJ, Schriver E, Tan AL, Moore J, Cai T, Omenn GS, Avillach P, Kohane IS, Visweswaran S, Mowery DL, Xia Z. Multinational Prevalence of Neurological Phenotypes in Patients Hospitalized with COVID-19. medRxiv edRxiv, 2021.

Bourgeois FT, Gutiérrez-Sacristán A, Keller MS, et al. International Analysis of Electronic Health Records of Children and Youth Hospitalized With COVID-19 Infection in 6 Countries. JAMA Netw Open. 2021;4(6):e2112596. doi:10.1001/jamanetworkopen.2021.12596

Weber GM, Hong C, Palmer NP, Avillach P, Murphy SN, Gutiérrez-Sacristán A, Xia Z, Serret-Larmande A, Neuraz A, Omenn GS, Visweswaran S, Klann JG, South AM, Loh NHW, Cannataro M, Beaulieu-Jones BK, Bellazzi R, Agapito G, Alessiani M, Aronow BJ, Bell DS, Bellasi A, Benoit V, Beraghi M, Boeker M, Booth J, Bosari S, Bourgeois FT, Brown NW, Bucalo M, Chiovato L, Chiudinelli L, Dagliati A, Devkota B, DuVall SL, Follett RW, Ganslandt T, García Barrio N, Gradinger T, Griffier R, Hanauer DA, Holmes JH, Horki P, Huling KM, Issitt RW, Jouhet V, Keller MS, Kraska D, Liu M, Luo Y, Lynch KE, Malovini A, Mandl KD, Mao C, Maram A, Matheny ME, Maulhardt T, Mazzitelli M, Milano M, Moore JH, Morris JS, Morris M, Mowery DL, Naughton TP, Ngiam KY, Norman JB, Patel LP, Pedrera Jimenez M, Ramoni RB, Schriver ER, Scudeller L, Sebire NJ, Serrano Balazote P, Spiridou A, Tan AL, Tan BWL, Tibollo V, Torti C, Trecarichi EM, Vitacca M, Zambelli A, Zucco C, Kohane IS, Cai T, Brat GA. International Comparisons of Harmonized Laboratory Value Trajectories to Predict Severe COVID-19: Leveraging the 4CE Collaborative Across 342 Hospitals and 6 Countries: A Retrospective Cohort Study. medRxiv edRxiv, 2021.

Klann JG, Weber GM, Estiri H, Moal B, Avillach P, Hong C, Castro V, Maulhardt T, Tan ALM, Geva A, Beaulieu-Jones BK, Malovini A, South AM, Visweswaran S, Omenn GS, Ngiam KY, Mandl KD, Boeker M, Olson KL, Mowery DL, Morris M, Follett RW, Hanauer DA, Bellazzi R, Moore JH, Loh NW, Bell DS, Wagholikar KB, Chiovato L, Tibollo V, Rieg S, Li ALLJ, Jouhet V, Schriver E, Samayamuthu MJ, Xia Z, Hutch M, Luo Y; Consortium for Clinical Characterization of COVID-19 by EHR (4CE) (CONSORTIA AUTHOR), Kohane IS, Brat GA, Murphy SN. Validation of an Internationally Derived Patient Severity Phenotype to Support COVID-19 Analytics from Electronic Health Record Data. J Am Med Inform Assoc Am Med Inform Assoc, 2021.

Brat GA, Weber GM, Gehlenborg N, Avillach P, Palmer NP, Chiovato L, Cimino J, Waitman LR, Omenn GS, Malovini A, Moore JH, Beaulieu-Jones BK, Tibollo V, Murphy SN, Yi SL, Keller MS, Bellazzi R, Hanauer DA, Serret-Larmande A, Gutierrez-Sacristan A, Holmes JJ, Bell DS, Mandl KD, Follett RW, Klann JG, Murad DA, Scudeller L, Bucalo M, Kirchoff K, Craig J, Obeid J, Jouhet V, Griffier R, Cossin S, Moal B, Patel LP, Bellasi A, Prokosch HU, Kraska D, Sliz P, Tan ALM, Ngiam KY, Zambelli A, Mowery DL, Schiver E, Devkota B, Bradford RL, Daniar M, Daniel C, Benoit V, Bey R, Paris N, Serre P, Orlova N, Dubiel J, Hilka M, Jannot AS, Breant S, Leblanc J, Griffon N, Burgun A, Bernaux M, Sandrin A, Salamanca E, Cormont S, Ganslandt T, Gradinger T, Champ J, Boeker M, Martel P, Esteve L, Gramfort A, Grisel O, Leprovost D, Moreau T, Varoquaux G, Vie JJ, Wassermann D, Mensch A, Caucheteux C, Haverkamp C, Lemaitre G, Bosari S, Krantz ID, South A, Cai T, Kohane IS. International electronic health record-derived COVID-19 clinical course profiles: the 4CE consortium. NPJ Digit Med 3: 109, Aug 2020.